python - 在 macbook m1 上安装 h5py 一直失败

问题描述

我正在尝试在我的 macbook m1 上安装 h5py。我首先brew install hdf5按照文档中的描述运行。然后我跑了pip3 install h5py，但这总是导致以下错误消息。我还尝试了这篇文章中的解决方案（How to install h5py (need for Keras) on MacOS with M1?），但结果相同。
Error compiling Cython file:
    ------------------------------------------------------------
    ...
            """(UINT index) => STRING
    
            Get the directory path at the given index (starting from 0) in the
            plugin search path. Returns a Python bytes object.
            """
            cpdef size_t n
                 ^
    ------------------------------------------------------------
    
    h5py/h5pl.pyx:64:14: Variables cannot be declared with 'cpdef'. Use 'cdef' instead.
    
    Error compiling Cython file:
    ------------------------------------------------------------
    ...
    
            Get the directory path at the given index (starting from 0) in the
            plugin search path. Returns a Python bytes object.
            """
            cpdef size_t n
            cpdef char* buf = NULL
                 ^
    ------------------------------------------------------------
    
    h5py/h5pl.pyx:65:14: Variables cannot be declared with 'cpdef'. Use 'cdef' instead.
    
    Error compiling Cython file:
    ------------------------------------------------------------
    ...
        cpdef size():
            """() => UINT
    
            Get the number of directories currently in the plugin search path.
            """
            cpdef unsigned int n = 0
                 ^
    ------------------------------------------------------------
    
    h5py/h5pl.pyx:80:14: Variables cannot be declared with 'cpdef'. Use 'cdef' instead.
    Traceback (most recent call last):
      File "<string>", line 1, in <module>
      File "/private/var/folders/y4/x78nk9h91fz6gtdc549t55g00000gn/T/pip-install-agzrcn_9/h5py_07ca596659e44c58afabe948244bd411/setup.py", line 140, in <module>
        setup(
      File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/site-packages/setuptools/__init__.py", line 145, in setup
        return distutils.core.setup(**attrs)
      File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/distutils/core.py", line 148, in setup
        dist.run_commands()
      File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/distutils/dist.py", line 966, in run_commands
        self.run_command(cmd)
      File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/distutils/dist.py", line 985, in run_command
        cmd_obj.run()
      File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/site-packages/setuptools/command/install.py", line 61, in run
        return orig.install.run(self)
      File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/distutils/command/install.py", line 561, in run
        self.run_command('build')
      File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/distutils/cmd.py", line 313, in run_command
        self.distribution.run_command(command)
      File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/distutils/dist.py", line 985, in run_command
        cmd_obj.run()
      File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/distutils/command/build.py", line 135, in run
        self.run_command(cmd_name)
      File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/distutils/cmd.py", line 313, in run_command
        self.distribution.run_command(command)
      File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/distutils/dist.py", line 985, in run_command
        cmd_obj.run()
      File "/private/var/folders/y4/x78nk9h91fz6gtdc549t55g00000gn/T/pip-install-agzrcn_9/h5py_07ca596659e44c58afabe948244bd411/setup_build.py", line 207, in run
        self.extensions = cythonize(self._make_extensions(config),
      File "/private/var/folders/y4/x78nk9h91fz6gtdc549t55g00000gn/T/pip-install-agzrcn_9/h5py_07ca596659e44c58afabe948244bd411/.eggs/Cython-3.0.0a9-py3.8.egg/Cython/Build/Dependencies.py", line 1116, in cythonize
        cythonize_one(*args)
      File "/private/var/folders/y4/x78nk9h91fz6gtdc549t55g00000gn/T/pip-install-agzrcn_9/h5py_07ca596659e44c58afabe948244bd411/.eggs/Cython-3.0.0a9-py3.8.egg/Cython/Build/Dependencies.py", line 1283, in cythonize_one
        raise CompileError(None, pyx_file)
    Cython.Compiler.Errors.CompileError: /private/var/folders/y4/x78nk9h91fz6gtdc549t55g00000gn/T/pip-install-agzrcn_9/h5py_07ca596659e44c58afabe948244bd411/h5py/h5pl.pyx
    ----------------------------------------
ERROR: Command errored out with exit status 1: /Library/Developer/CommandLineTools/usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/y4/x78nk9h91fz6gtdc549t55g00000gn/T/pip-install-agzrcn_9/h5py_07ca596659e44c58afabe948244bd411/setup.py'"'"'; __file__='"'"'/private/var/folders/y4/x78nk9h91fz6gtdc549t55g00000gn/T/pip-install-agzrcn_9/h5py_07ca596659e44c58afabe948244bd411/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /private/var/folders/y4/x78nk9h91fz6gtdc549t55g00000gn/T/pip-record-b42l5c9z/install-record.txt --single-version-externally-managed --user --prefix= --compile --install-headers /Users/adrianwestphal/Library/Python/3.8/include/python3.8/h5py Check the logs for full command output.
标签： pythonpiphdf5h5pyapple-m1
python - 在 macbook m1 上安装 h5py 一直失败

问题描述

解决方案

推荐阅读
